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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943995.1_cds_XP_016486935.1_77724
CDS Infomation

[gene=LOC107807130] [db_xref=GeneID:107807130] [protein=ribosomal RNA small subunit methyltransferase NEP1-like] [protein_id=XP_016486935.1] [location=join(40185..40433,40634..40726,43510..43654,43762..43872,43961..44043,44122..44179,44813..44892)] [gbkey=CDS]
Sequence

ATGGTGCGAGCGTACAAAGTAAAAGGGGAAAAGAGGAAAAAGAAAGGAGAGAATTATGAT
AAGGAAGAAATAGAGGAAAAGGAGTCAGGAAAAAGAGGGAGAACAGAAGCAGACACAGAG
GCAGAGGCAGCTGAACGAGTTGTAGATTTACTGGCTGGTATTCCGGCTGTTTCAACTGAT
CAAAGCACCAAACCTGGTGTTATTTTCATCATCGAAAGAGCTTCTCTGGAAATTGCTAAA
ATTGGAAAGACTTCCCAATTTCTCAACTCAGATGAACATTCCAACTTTCTGAAGAAGAAT
AATCGAAACCCTTCTGATTATCGACCTGATATTGCTCATCAGGCAATGCTTTCAATTTTA
GATAGCCGAGTGAATAAAGCTGGGAGATTAAAAGCTTTGTATGTGAAGACTGAGAAAGGT
GACCTATTTGAAGTAAAATCTCATGTTCGTATTCCTAGGACGTTTAAACGATTTGCTGGC
ATTATGTTGCAGCTGCTACTAAACCGGAGCATAACTGCTGTTGGTAAGCGAGAGAAACTG
TTACGTGTTATAGAAAACCCTGTTTCAAAGCACCTACCCATTGACTGTAGAAAGATAGGC
CTCTCTCATAGTTCTGAGAAGCTGGTGGATATTCAGGAATATGTTAATGGCATCAACAAG
GACATGAACCTTGTTTTTGTGGTTGGGGCAATGGCCCACGGGAAAATTGATAAAGATTAT
GTCGAAGATTATCTATCGATTTCTGATTATCCATTGAGTGCTGCATACTGCATATCCATG
ATCACAAATGCTGTGGAGCGCAAATGGAAGATTTTGTAG

Peptide Sequence

PEP ID

XP_016486935.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Nicotiana tabacum]
Sequence

MVRAYKVKGEKRKKKGENYDKEEIEEKESGKRGRTEADTEAEAAERVVDLLAGIPAVSTD
QSTKPGVIFIIERASLEIAKIGKTSQFLNSDEHSNFLKKNNRNPSDYRPDIAHQAMLSIL
DSRVNKAGRLKALYVKTEKGDLFEVKSHVRIPRTFKRFAGIMLQLLLNRSITAVGKREKL
LRVIENPVSKHLPIDCRKIGLSHSSEKLVDIQEYVNGINKDMNLVFVVGAMAHGKIDKDY
VEDYLSISDYPLSAAYCISMITNAVERKWKIL

Transcript Sequence

Gene sequence data has not been registered.